09:00:30.307 [http-8080-6] ERROR org.hibernate.transaction.JDBCTransaction -JDBC begin failed com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure The last packet successfully received from the server was 56,237,340 milliseconds ago. The last packet sent successfully to the server was 1 milliseconds ago. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[na:1.6.0_13] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) ~[na:1.6.0_13] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) ~[na:1.6.0_13] at java.lang.reflect.Constructor.newInstance(Constructor.java:513) ~[na:1.6.0_13] at com.mysql.jdbc.Util.handleNewInstance(Util.java:411) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1117) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.MysqlIO.reuseAndReadPacket(MysqlIO.java:3567) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.MysqlIO.reuseAndReadPacket(MysqlIO.java:3456) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3997) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2468) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2629) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2713) ~[mysql-connector-java-5.1.21.jar:na] at com.mysql.jdbc.ConnectionImpl.setAutoCommit(ConnectionImpl.java:5060) ~[mysql-connector-java-5.1.21.jar:na] at org.apache.commons.dbcp.DelegatingConnection.setAutoCommit(DelegatingConnection.java:371) ~[commons-dbcp-1.4.jar:1.4] at org.apache.commons.dbcp.PoolingDataSource$PoolGuardConnectionWrapper.setAutoCommit(PoolingDataSource.java:328) ~[commons-dbcp-1.4.jar:1.4] at sun.reflect.GeneratedMethodAccessor55.invoke(Unknown Source) ~[na:na] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) ~[na:1.6.0_13] at java.lang.reflect.Method.invoke(Method.java:597) ~[na:1.6.0_13] at net.bull.javamelody.JdbcWrapper$ConnectionInvocationHandler.invoke(JdbcWrapper.java:185) ~[javamelody-1.49.0.jar:na] at net.bull.javamelody.JdbcWrapper$DelegatingInvocationHandler.invoke(JdbcWrapper.java:282) ~[javamelody-1.49.0.jar:na] at $Proxy36.setAutoCommit(Unknown Source) ~[na:na] at org.hibernate.transaction.JDBCTransaction.begin(JDBCTransaction.java:91) ~[hibernate-core-3.5.6-Final.jar:3.5.6-Final] at org.hibernate.impl.SessionImpl.beginTransaction(SessionImpl.java:1463) [hibernate-core-3.5.6-Final.jar:3.5.6-Final] at org.springframework.orm.hibernate3.HibernateTransactionManager.doBegin(HibernateTransactionManager.java:555) [spring-orm-3.1.1.RELEASE.jar:3.1.1.RELEASE] at org.springframework.transaction.support.AbstractPlatformTransactionManager.getTransaction(AbstractPlatformTransactionManager.java:371) [spring-tx-3.1.1.RELEASE.jar:3.1.1.RELEASE] at org.springframework.transaction.interceptor.TransactionAspectSupport.createTransactionIfNecessary(TransactionAspectSupport.java:335) [spring-tx-3.1.1.RELEASE.jar:3.1.1.RELEASE] at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:105) [spring-tx-3.1.1.RELEASE.jar:3.1.1.RELEASE] at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) [spring-aop-3.1.1.RELEASE.jar:3.1.1.RELEASE] at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) [spring-aop-3.1.1.RELEASE.jar:3.1.1.RELEASE] at $Proxy72.findPageByORMSearch(Unknown Source) [na:na]
网上看到这两个解决办法。验证中。
一是修改my.cnf：
[mysqld]
wait_timeout=31536000
interactive_timeout=31536000
将过期时间修改为1年。
二是在连接URL上添加参数：&autoReconnect=true&failOverReadOnly=false
最终解决办法：URL添加参数貌似不管用，我用的是mysql5.6，网上说这个5以前的版本才有效。所以只能使用改mysql配置的方法了。
上述问题是由mysql5数据库的配置引起的。mysql5将其连接的等待时间(wait_timeout)缺省为8小时。在其客户程序中可以这样来查看其值：
mysql﹥
mysql﹥ show global variables like 'wait_timeout';
+---------------+---------+
| Variable_name | Value |
+---------------+---------+
| wait_timeout | 28800 |
+---------------+---------+
1 row in set (0.00 sec)
28800 seconds，也就是8小时。
如果在wait_timeout秒期间内，数据库连接(java.sql.Connection)一直处于等待状态，mysql5就将该连接关闭。这时，你的Java应用的连接池仍然合法地持有该连接的引用。当用该连接来进行数据库操作时，就碰到上述错误。这解释了为什么我的程序第二天不能登录 的问题。
本人觉得最简单的办法，就是对症下药：既然问题是由mysql5的全局变量wait_timeout的缺省值太小引起的，我们将其改大就好了。
查看mysql5的手册，发现对wait_timeout的最大值分别是24天/365天(windows/linux)。以windows为 例，假设我们要将其设为21天，我们只要修改mysql5的配置文件“my.ini”(mysql5 installation dir)，增加一行：wait_timeout=1814400
需要重新启动mysql5。
linux系统配置文件：/etc/my.cnf
测试显示问题解决了。